Index

_

_add_inbound_node() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) _add_variable_with_custom_getter() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) _all_buffers() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method) _apply() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method) _assert_input_compatibility() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) _checkpoint_dependencies (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute) _convlinear() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) _convolution() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) _default_crnn_activation() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) _defaults (mdgru.data.DataCollection attribute) (mdgru.data.grid_collection.GridDataCollection attribute) (mdgru.data.grid_collection.ThreadedGridDataCollection attribute) (mdgru.eval.SupervisedEvaluation attribute), [1] (mdgru.eval.tf.SupervisedEvaluationTensorflow attribute), [1] (mdgru.eval.torch.SupervisedEvaluationTorch attribute), [1] (mdgru.model.ClassificationModel attribute) (mdgru.model.GANModel attribute) (mdgru.model.Model attribute) (mdgru.model.ReconstructionModel attribute) (mdgru.model.RegressionModel attribute) (mdgru.model.crnn.CRNNCell attribute) (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.mdgru_classification.MDGRUClassification attribute) (mdgru.model.mdgru_classification.MDGRUClassificationWithDiceLoss attribute) (mdgru.model.mdgru_classification.MDGRUClassificationWithGeneralizedDiceLoss attribute) (mdgru.model.mdrnn.MDGRUNet attribute) (mdgru.model.mdrnn.mdgru.MDRNN attribute) (mdgru.model_pytorch.ClassificationModel attribute) (mdgru.model_pytorch.GANModel attribute) (mdgru.model_pytorch.Model attribute) (mdgru.model_pytorch.ReconstructionModel attribute) (mdgru.model_pytorch.RegressionModel attribute) (mdgru.model_pytorch.crnn.CRNNCell attribute) (mdgru.model_pytorch.crnn.cgru.CGRUCell attribute) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification attribute) (mdgru.model_pytorch.mdrnn.MDGRUBlock attribute) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN attribute) (mdgru.runner.Runner attribute) _deferred_dependencies (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute) _extract_sample() (mdgru.data.grid_collection.GridDataCollection method) (mdgru.data.grid_collection.ThreadedGridDataCollection method) _finish() (mdgru.runner.Runner method) _gather_saveables_for_checkpoint() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) _get_deform_field_dm() (mdgru.data.grid_collection.GridDataCollection method) (mdgru.data.grid_collection.ThreadedGridDataCollection method) _get_dropconnect() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) _get_features_and_masks() (mdgru.data.grid_collection.GridDataCollection method) (mdgru.data.grid_collection.ThreadedGridDataCollection method) _get_name() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method) _get_node_attribute_at_index() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) _get_weights_h() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) _get_weights_x() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method)

_handle_deferred_dependencies() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) _init_set_name() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) _initializer_Q() (in module mdgru.helper) _load() (mdgru.eval.SupervisedEvaluation method), [1] (mdgru.eval.tf.SupervisedEvaluationTensorflow method), [1] (mdgru.eval.torch.SupervisedEvaluationTorch method), [1] _load_from_state_dict() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method) _lookup_dependency() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) _make_unique_name() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) _maybe_initialize_checkpointable() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) _name_scope_name() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) _one_hot_vectorize() (mdgru.data.DataCollection method) (mdgru.data.grid_collection.GridDataCollection method) (mdgru.data.grid_collection.ThreadedGridDataCollection method) _optimistic_restore() (mdgru.eval.tf.SupervisedEvaluationTensorflow method), [1] _paddata() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) _predict() (mdgru.eval.SupervisedEvaluation method), [1] (mdgru.eval.tf.SupervisedEvaluationTensorflow method), [1] (mdgru.eval.torch.SupervisedEvaluationTorch method), [1] _predict_with_loss() (mdgru.eval.SupervisedEvaluation method), [1] (mdgru.eval.tf.SupervisedEvaluationTensorflow method), [1] (mdgru.eval.torch.SupervisedEvaluationTorch method), [1] _preload_random_sample() (mdgru.data.grid_collection.ThreadedGridDataCollection method) _preload_simple_restoration() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) _restore_from_checkpoint_position() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) _rnn_get_variable() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) _rotate() (mdgru.data.grid_collection.GridDataCollection method) (mdgru.data.grid_collection.ThreadedGridDataCollection method) _save() (mdgru.eval.SupervisedEvaluation method), [1] (mdgru.eval.tf.SupervisedEvaluationTensorflow method), [1] (mdgru.eval.torch.SupervisedEvaluationTorch method), [1] _save_summary_for_2d_image() (in module mdgru.model) _set_scope() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) _set_session() (mdgru.eval.SupervisedEvaluation method), [1] (mdgru.eval.tf.SupervisedEvaluationTensorflow method), [1] (mdgru.eval.torch.SupervisedEvaluationTorch method), [1] _single_restoration_from_checkpoint_position() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) _slow_forward() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method) _tf_api_names (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute) _tracing_name() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method) _track_checkpointable() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) _train() (mdgru.eval.SupervisedEvaluation method), [1] (mdgru.eval.tf.SupervisedEvaluationTensorflow method), [1] (mdgru.eval.torch.SupervisedEvaluationTorch method), [1] _version (mdgru.model_pytorch.ClassificationModel attribute) (mdgru.model_pytorch.GANModel attribute) (mdgru.model_pytorch.Model attribute) (mdgru.model_pytorch.ReconstructionModel attribute) (mdgru.model_pytorch.RegressionModel attribute) (mdgru.model_pytorch.crnn.CRNNCell attribute) (mdgru.model_pytorch.crnn.cgru.CGRUCell attribute) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification attribute) (mdgru.model_pytorch.mdrnn.MDGRUBlock attribute) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN attribute)

A

activity_regularizer (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute) add_cgru() (mdgru.model.mdrnn.mdgru.MDRNN method) add_loss() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) add_module() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method) add_summary_simple_value() (mdgru.eval.SupervisedEvaluation method), [1] (mdgru.eval.tf.SupervisedEvaluationTensorflow method), [1] (mdgru.eval.torch.SupervisedEvaluationTorch method), [1]

add_update() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) add_variable() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) affine (mdgru.data.grid_collection.GridDataCollection attribute) (mdgru.data.grid_collection.ThreadedGridDataCollection attribute) apply() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method) argget() (in module mdgru.helper)

B

batch_norm() (in module mdgru.model)

build() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method)

C

calc_min_mean_median_max_errors() (mdgru.runner.Runner method) call() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) CGRUCell (class in mdgru.model.crnn.cgru) (class in mdgru.model_pytorch.crnn.cgru) CGRUCell.to() (in module mdgru.model_pytorch.crnn.cgru), [1], [2] check_if_kw_empty() (in module mdgru.helper) check_input() (mdgru.eval.torch.SupervisedEvaluationTorch method), [1] children() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method) ClassificationModel (class in mdgru.model) (class in mdgru.model_pytorch) ClassificationModel.to() (in module mdgru.model_pytorch), [1], [2] collect_parameters() (in module mdgru.helper) (mdgru.model.mdgru_classification.MDGRUClassification static method) (mdgru.model.mdgru_classification.MDGRUClassificationWithDiceLoss method) (mdgru.model.mdgru_classification.MDGRUClassificationWithGeneralizedDiceLoss method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification static method) compile_arguments() (in module mdgru.helper) (mdgru.model.mdgru_classification.MDGRUClassification static method) (mdgru.model.mdgru_classification.MDGRUClassificationWithDiceLoss method) (mdgru.model.mdgru_classification.MDGRUClassificationWithGeneralizedDiceLoss method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification static method) compute_output_shape() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) convolution_helper_padding_same() (in module mdgru.model) cost (mdgru.model.ClassificationModel attribute) (mdgru.model.GANModel attribute) (mdgru.model.Model attribute) (mdgru.model.ReconstructionModel attribute) (mdgru.model.RegressionModel attribute) (mdgru.model.mdgru_classification.MDGRUClassification attribute) (mdgru.model.mdgru_classification.MDGRUClassificationWithDiceLoss attribute) (mdgru.model.mdgru_classification.MDGRUClassificationWithGeneralizedDiceLoss attribute)

costs (mdgru.model.mdgru_classification.MDGRUClassification attribute) (mdgru.model.mdgru_classification.MDGRUClassificationWithDiceLoss attribute) (mdgru.model.mdgru_classification.MDGRUClassificationWithGeneralizedDiceLoss attribute) costs() (mdgru.model.ClassificationModel method) (mdgru.model.GANModel method) (mdgru.model.Model method) (mdgru.model.ReconstructionModel method) (mdgru.model.RegressionModel method) count_params() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) counter_generator() (in module mdgru.helper) cpu() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method) CRNNCell (class in mdgru.model.crnn) (class in mdgru.model_pytorch.crnn) CRNNCell.to() (in module mdgru.model_pytorch.crnn), [1], [2] cuda() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method)

D

DataCollection (class in mdgru.data) define_arguments() (in module mdgru.helper) deprecated() (in module mdgru.helper) double() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method)

dtype (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute) dump_patches (mdgru.model_pytorch.ClassificationModel attribute) (mdgru.model_pytorch.GANModel attribute) (mdgru.model_pytorch.Model attribute) (mdgru.model_pytorch.ReconstructionModel attribute) (mdgru.model_pytorch.RegressionModel attribute) (mdgru.model_pytorch.crnn.CRNNCell attribute) (mdgru.model_pytorch.crnn.cgru.CGRUCell attribute) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification attribute) (mdgru.model_pytorch.mdrnn.MDGRUBlock attribute) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN attribute)

E

eval() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method)

extra_repr() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method)

F

float() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method)

force_symlink() (in module mdgru.helper) forward() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method)

G

GANModel (class in mdgru.model) (class in mdgru.model_pytorch) GANModel.to() (in module mdgru.model_pytorch), [1], [2] generate_defaults_info() (in module mdgru.helper) get_all_tps() (mdgru.data.DataCollection static method) (mdgru.data.grid_collection.GridDataCollection method) (mdgru.data.grid_collection.ThreadedGridDataCollection method) get_data_dims() (mdgru.data.DataCollection method) (mdgru.data.grid_collection.GridDataCollection method) (mdgru.data.grid_collection.ThreadedGridDataCollection method) get_globalstep() (mdgru.eval.SupervisedEvaluation method), [1] (mdgru.eval.tf.SupervisedEvaluationTensorflow method), [1] (mdgru.eval.torch.SupervisedEvaluationTorch method), [1] get_input_at() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) get_input_shape_at() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) get_losses_for() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) get_model_name_from_ckpt() (mdgru.model.ClassificationModel method) (mdgru.model.GANModel method) (mdgru.model.Model static method) (mdgru.model.ReconstructionModel method) (mdgru.model.RegressionModel method) (mdgru.model.mdgru_classification.MDGRUClassification method) (mdgru.model.mdgru_classification.MDGRUClassificationWithDiceLoss method) (mdgru.model.mdgru_classification.MDGRUClassificationWithGeneralizedDiceLoss method) (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model static method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method)

get_modified_xavier_method() (in module mdgru.model) get_output_at() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) get_output_shape_at() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) get_pseudo_orthogonal_block_circulant_initialization() (in module mdgru.model) get_shape() (mdgru.data.DataCollection method) (mdgru.data.grid_collection.GridDataCollection method) (mdgru.data.grid_collection.ThreadedGridDataCollection method) get_states() (mdgru.data.DataCollection method) (mdgru.data.grid_collection.GridDataCollection method) (mdgru.data.grid_collection.ThreadedGridDataCollection method) get_target_shape() (mdgru.data.grid_collection.GridDataCollection method) (mdgru.data.grid_collection.ThreadedGridDataCollection method) get_updates_for() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method) get_volume_batch_generators() (mdgru.data.grid_collection.GridDataCollection method) (mdgru.data.grid_collection.ThreadedGridDataCollection method) graph (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute) GridDataCollection (class in mdgru.data.grid_collection)

H

half() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method)

harmonize_filter_size() (in module mdgru.helper)

I

ignore_signal (mdgru.runner.Runner attribute) inbound_nodes (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute) init_weights() (in module mdgru.model_pytorch) initialize() (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method)

initialize_weights() (mdgru.model_pytorch.crnn.cgru.CGRUCell method) initializer_W() (in module mdgru.helper) input (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute) input_shape (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute)

L

labellist (mdgru.data.grid_collection.GridDataCollection attribute) (mdgru.data.grid_collection.ThreadedGridDataCollection attribute) lazy_property() (in module mdgru.helper) (in module mdgru.model_pytorch) load() (mdgru.data.grid_collection.GridDataCollection method) (mdgru.data.grid_collection.ThreadedGridDataCollection method) (mdgru.eval.SupervisedEvaluation method), [1] (mdgru.eval.tf.SupervisedEvaluationTensorflow method), [1] (mdgru.eval.torch.SupervisedEvaluationTorch method), [1] load_state_dict() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method)

logits (mdgru.model.mdgru_classification.MDGRUClassification attribute) (mdgru.model.mdgru_classification.MDGRUClassificationWithDiceLoss attribute) (mdgru.model.mdgru_classification.MDGRUClassificationWithGeneralizedDiceLoss attribute) losses (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute)

M

mdgru.data (module) mdgru.data.grid_collection (module) mdgru.eval (module), [1] mdgru.eval.tf (module), [1] mdgru.eval.torch (module), [1] mdgru.helper (module) mdgru.model (module) mdgru.model.crnn (module) mdgru.model.crnn.cgru (module) mdgru.model.mdgru_classification (module) mdgru.model.mdrnn (module) mdgru.model.mdrnn.mdgru (module) mdgru.model_pytorch (module) mdgru.model_pytorch.crnn (module) mdgru.model_pytorch.crnn.cgru (module) mdgru.model_pytorch.mdgru_classification (module) mdgru.model_pytorch.mdrnn (module) mdgru.model_pytorch.mdrnn.mdgru (module) mdgru.runner (module) mdgru_bb() (mdgru.model.mdgru_classification.MDGRUClassification method) (mdgru.model.mdgru_classification.MDGRUClassificationWithDiceLoss method) (mdgru.model.mdgru_classification.MDGRUClassificationWithGeneralizedDiceLoss method) (mdgru.model.mdrnn.MDGRUNet method)

MDGRUBlock (class in mdgru.model_pytorch.mdrnn) MDGRUBlock.to() (in module mdgru.model_pytorch.mdrnn), [1], [2] MDGRUClassification (class in mdgru.model.mdgru_classification) (class in mdgru.model_pytorch.mdgru_classification) MDGRUClassification.to() (in module mdgru.model_pytorch.mdgru_classification), [1], [2] MDGRUClassificationWithDiceLoss (class in mdgru.model.mdgru_classification) MDGRUClassificationWithGeneralizedDiceLoss (class in mdgru.model.mdgru_classification) MDGRUNet (class in mdgru.model.mdrnn) MDRNN (class in mdgru.model.mdrnn.mdgru) (class in mdgru.model_pytorch.mdrnn.mdgru) MDRNN.to() (in module mdgru.model_pytorch.mdrnn.mdgru), [1], [2] Model (class in mdgru.model) (class in mdgru.model_pytorch) Model.to() (in module mdgru.model_pytorch), [1], [2] modules() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method)

N

name (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute) named_children() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method) named_modules() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method)

named_parameters() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method) non_trainable_variables (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute) non_trainable_weights (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute) notify_user() (in module mdgru.helper) np_arr_backward() (in module mdgru.helper) np_arr_forward() (in module mdgru.helper)

O

optimize (mdgru.model.mdgru_classification.MDGRUClassification attribute) (mdgru.model.mdgru_classification.MDGRUClassificationWithDiceLoss attribute) (mdgru.model.mdgru_classification.MDGRUClassificationWithGeneralizedDiceLoss attribute) outbound_nodes (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute) output (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute)

output_shape (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute) output_size (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute) (mdgru.model_pytorch.crnn.CRNNCell attribute) (mdgru.model_pytorch.crnn.cgru.CGRUCell attribute)

P

parameters() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method) pixdim (mdgru.data.grid_collection.GridDataCollection attribute) (mdgru.data.grid_collection.ThreadedGridDataCollection attribute)

prediction (mdgru.model.mdgru_classification.MDGRUClassification attribute) (mdgru.model.mdgru_classification.MDGRUClassificationWithDiceLoss attribute) (mdgru.model.mdgru_classification.MDGRUClassificationWithGeneralizedDiceLoss attribute) prediction() (mdgru.model.ClassificationModel method) (mdgru.model.GANModel method) (mdgru.model.Model method) (mdgru.model.ReconstructionModel method) (mdgru.model.RegressionModel method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) preload_all() (mdgru.data.grid_collection.GridDataCollection method) (mdgru.data.grid_collection.ThreadedGridDataCollection method)

R

random_sample() (mdgru.data.DataCollection method) (mdgru.data.grid_collection.GridDataCollection method) (mdgru.data.grid_collection.ThreadedGridDataCollection method) ReconstructionModel (class in mdgru.model) (class in mdgru.model_pytorch) ReconstructionModel.to() (in module mdgru.model_pytorch), [1], [2] register_backward_hook() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method) register_buffer() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method) register_forward_hook() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method)

register_forward_pre_hook() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method) register_parameter() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method) RegressionModel (class in mdgru.model) (class in mdgru.model_pytorch) RegressionModel.to() (in module mdgru.model_pytorch), [1], [2] reset_seed() (mdgru.data.DataCollection method) (mdgru.data.grid_collection.GridDataCollection method) (mdgru.data.grid_collection.ThreadedGridDataCollection method) run() (mdgru.runner.Runner method) RUN_mdgru (module) run_mdgru() (in module RUN_mdgru) Runner (class in mdgru.runner)

S

save() (mdgru.data.grid_collection.GridDataCollection method) (mdgru.data.grid_collection.ThreadedGridDataCollection method) (mdgru.eval.SupervisedEvaluation method), [1] (mdgru.eval.tf.SupervisedEvaluationTensorflow method), [1] (mdgru.eval.torch.SupervisedEvaluationTorch method), [1] (mdgru.runner.Runner method) save_summary_for_nd_images() (in module mdgru.model) scope_name (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute) set_allowed_gpu_memory_fraction() (mdgru.model.ClassificationModel method) (mdgru.model.GANModel method) (mdgru.model.Model static method) (mdgru.model.ReconstructionModel method) (mdgru.model.RegressionModel method) (mdgru.model.mdgru_classification.MDGRUClassification method) (mdgru.model.mdgru_classification.MDGRUClassificationWithDiceLoss method) (mdgru.model.mdgru_classification.MDGRUClassificationWithGeneralizedDiceLoss method) (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model static method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) set_session() (mdgru.eval.SupervisedEvaluation method), [1] (mdgru.eval.tf.SupervisedEvaluationTensorflow method), [1] (mdgru.eval.torch.SupervisedEvaluationTorch method), [1] set_states() (mdgru.data.DataCollection method) (mdgru.data.grid_collection.GridDataCollection method) (mdgru.data.grid_collection.ThreadedGridDataCollection method)

share_memory() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method) state_dict() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method) state_size (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute) (mdgru.model_pytorch.crnn.CRNNCell attribute) (mdgru.model_pytorch.crnn.cgru.CGRUCell attribute) subtract_gauss() (mdgru.data.grid_collection.GridDataCollection method) (mdgru.data.grid_collection.ThreadedGridDataCollection method) SupervisedEvaluation (class in mdgru.eval), [1] SupervisedEvaluationTensorflow (class in mdgru.eval.tf), [1] SupervisedEvaluationTorch (class in mdgru.eval.torch), [1]

T

test() (mdgru.runner.Runner method) test_all_available() (mdgru.eval.SupervisedEvaluation method), [1] (mdgru.eval.tf.SupervisedEvaluationTensorflow method), [1] (mdgru.eval.torch.SupervisedEvaluationTorch method), [1] test_all_random() (mdgru.eval.SupervisedEvaluation method), [1] (mdgru.eval.tf.SupervisedEvaluationTensorflow method), [1] (mdgru.eval.torch.SupervisedEvaluationTorch method), [1] test_scores() (mdgru.eval.SupervisedEvaluation method), [1] (mdgru.eval.tf.SupervisedEvaluationTensorflow method), [1] (mdgru.eval.torch.SupervisedEvaluationTorch method), [1] ThreadedGridDataCollection (class in mdgru.data.grid_collection) to() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method) train() (mdgru.eval.SupervisedEvaluation method), [1] (mdgru.eval.tf.SupervisedEvaluationTensorflow method), [1] (mdgru.eval.torch.SupervisedEvaluationTorch method), [1] (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method) (mdgru.runner.Runner method)

trainable_variables (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute) trainable_weights (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute) transformAffine() (mdgru.data.grid_collection.GridDataCollection method) (mdgru.data.grid_collection.ThreadedGridDataCollection method) type() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method)

U

updates (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute)

V

validation() (mdgru.runner.Runner method)

variables (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute)

W

w (mdgru.data.grid_collection.GridDataCollection attribute) (mdgru.data.grid_collection.ThreadedGridDataCollection attribute)

weights (mdgru.model.crnn.cgru.CGRUCell attribute) (mdgru.model.crnn.CRNNCell attribute) write_error_to_csv() (mdgru.runner.Runner method)

Z

zero_grad() (mdgru.model_pytorch.ClassificationModel method) (mdgru.model_pytorch.GANModel method) (mdgru.model_pytorch.Model method) (mdgru.model_pytorch.ReconstructionModel method) (mdgru.model_pytorch.RegressionModel method) (mdgru.model_pytorch.crnn.CRNNCell method) (mdgru.model_pytorch.crnn.cgru.CGRUCell method) (mdgru.model_pytorch.mdgru_classification.MDGRUClassification method) (mdgru.model_pytorch.mdrnn.MDGRUBlock method) (mdgru.model_pytorch.mdrnn.mdgru.MDRNN method)

zero_state() (mdgru.model.crnn.cgru.CGRUCell method) (mdgru.model.crnn.CRNNCell method)